PXD003701 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Urea artifacts interfere with immunopurification of lysine acetylation |
Description | Urea-based buffers can induce carbamylation artefacts. Here we report that carbamylation of lysine residues resembles the structure of acetylated lysines (K-ac) and compete during K-ac immunoaffinity purification. We propose an alternative strategy using an ionic detergent which improves significantly the selectivity and efficiency of K-ac affinity immuno-purifications. |
HostingRepository | PRIDE |
AnnounceDate | 2017-10-24 |
AnnouncementXML | Submission_2017-10-24_04:43:55.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Ana Martinez |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | carbamoylated residue; monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue |
Instrument | Bruker Daltonics maXis series |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-02-26 04:13:00 | ID requested | |
1 | 2017-01-11 02:36:56 | announced | |
⏵ 2 | 2017-10-24 04:43:56 | announced | Updated project metadata. |
Publication List
Martinez-Val A, Garcia F, Xim, é, nez-Emb, ú, n P, Mart, í, nez Teresa-Calleja A, Ibarz N, Ruppen I, Munoz J, Urea Artifacts Interfere with Immuno-Purification of Lysine Acetylation. J Proteome Res, 16(2):1061-1068(2017) [pubmed] |
Keyword List
curator keyword: Biomedical |
submitter keyword: Carbamyl, acetyl, urea, immunopurification, acetylation, carbamylation |
Contact List
Javier Muñoz Peralta |
contact affiliation | Spanish National Cancer Research Centre (CNIO) |
contact email | jmunozpe@cnio.es |
lab head | |
Ana Martinez |
contact affiliation | Spanish National Cancer Research Centre |
contact email | amdelval@cnio.es |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/01/PXD003701 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD003701
- Label: PRIDE project
- Name: Urea artifacts interfere with immunopurification of lysine acetylation