PXD002890-1

PXD002890 is an original dataset announced via ProteomeXchange.

Title	mRNA interactome in mouse macrophages
Description	Proteins interacting with mRNA in mouse macrophages were identified by crosslinking and oligodT capture. Differential interaction was investigated in macrophages before and after treatment with LPS.
HostingRepository	PRIDE
AnnounceDate	2016-06-13
AnnouncementXML	Submission_2016-06-13_07:26:21.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sophia Foehr
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2015-09-10 05:59:44	ID requested
⏵ 1	2016-06-13 07:26:22	announced
2	2024-10-22 04:30:01	announced	2024-10-22: Updated project metadata.

Liepelt A, Naarmann-de Vries IS, Simons N, Eichelbaum K, F, ö, hr S, Archer SK, Castello A, Usadel B, Krijgsveld J, Preiss T, Marx G, Hentze MW, Ostareck DH, Ostareck-Lederer A, Identification of RNA-binding Proteins in Macrophages by Interactome Capture. Mol Cell Proteomics, 15(8):2699-714(2016) [pubmed]

curator keyword: Biological

submitter keyword: mRNA, protein interaction, macrophage

Jeroen Krijgsveld
contact affiliation	German Cancer Research Center (DKFZ)
contact email	j.krijgsveld@dkfz.de
lab head
Sophia Foehr
contact affiliation	EMBL
contact email	foehr@embl.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/06/PXD002890

PRIDE project URI

• PRIDE
  1. PXD002890
     1. Label: PRIDE project
     2. Name: mRNA interactome in mouse macrophages