PXD002833 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteome-wide analysis of lysine succinylation in 5 organisms |
Description | Recent studies have revealed the physiological significance of post-translational lysine acylations in regulation of various cellular processes. Lysine succinylation is one of recently discovered post-translational acylations. To understand the distribution of lysine succinylations in five representative bacteria: Geobacillus kaustophilus, Thermus thermophilus, Escherichia coli, Bacillus subtilis, and Rhodothermus marinus. |
HostingRepository | PRIDE |
AnnounceDate | 2017-10-24 |
AnnouncementXML | Submission_2017-10-24_03:00:54.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD002833 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Hiroki Okanishi |
SpeciesList | scientific name: Bacillus subtilis subsp. subtilis str. 168; NCBI TaxID: 224308; scientific name: Geobacillus kaustophilus HTA426; NCBI TaxID: 235909; scientific name: Escherichia coli (strain K12 / W3110 / ATCC 27325 / DSM 5911); NCBI TaxID: 316407; scientific name: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); NCBI TaxID: 300852; scientific name: Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis); NCBI TaxID: 518766; |
ModificationList | N6-succinyl-L-lysine; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | micrOTOF-Q II |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2015-09-01 03:57:45 | ID requested | |
1 | 2016-12-21 06:37:01 | announced | |
⏵ 2 | 2017-10-24 03:00:55 | announced | Updated project metadata. |
Publication List
Okanishi H, Kim K, Fukui K, Yano T, Kuramitsu S, Masui R, Proteome-wide identification of lysine succinylation in thermophilic and mesophilic bacteria. Biochim Biophys Acta Proteins Proteom, 1865(2):232-242(2017) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: Lysine succinylation, Post-translational modification |
Contact List
Ryoji Masui |
contact affiliation | Div. Biol. Geosci., Grad. Sch. Sci., Osaka City Univ., Japan |
contact email | rmasui@sci.osaka-cu.ac.jp |
lab head | |
Hiroki Okanishi |
contact affiliation | Osaka University |
contact email | okanishi@bio.sci.osaka-u.ac.jp |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD002833
- Label: PRIDE project
- Name: Proteome-wide analysis of lysine succinylation in 5 organisms