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PXD002124-1
PXD002124 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Zebrafish Deyolking Survey |
| Description | Deyolking, the removal of the most abundant protein from the zebrafish (Danio rerio) embryo, is a common technique for in-depth exploration of proteome-level changes in vivo due to various environmental stressors or pharmacological impacts during embryonic stage of development. However, the effect of this procedure on the remaining proteome has not been fully studied. Here, we report a label-free shotgun proteomics survey on proteome coverage and biological processes that are enriched and depleted as a result of deyolking. |
| HostingRepository | PRIDE |
| AnnounceDate | 2015-10-14 |
| AnnouncementXML | Submission_2015-10-14_05:15:46.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Laszlo Prokai |
| SpeciesList | scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955; |
| ModificationList | deamidated residue; monohydroxylated residue; iodoacetamide derivatized residue |
| Instrument | LTQ Orbitrap Velos |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2015-04-30 00:48:50 | ID requested | |
| ⏵ 1 | 2015-10-14 05:15:47 | announced | |
| 2 | 2024-10-22 04:24:00 | announced | 2024-10-22: Updated project metadata. |
Publication List
Keyword List
| curator keyword: Biological |
| submitter keyword: Zebrafish, Deyolking, Label-free Proteomics, Bioinformatics |
Contact List
| Laszlo Prokai | |
|---|---|
| contact affiliation | Department of Pharmacology and Neuroscience |
| contact email | Laszlo.Prokai@unthsc.edu |
| lab head | |
| Laszlo Prokai | |
| contact affiliation | Department of Pharmacology and Neuroscience |
| contact email | advancedms@unthsc.edu |
| dataset submitter | |
Full Dataset Link List
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/10/PXD002124 |
| PRIDE project URI |
Repository Record List
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