PXD001165-2

PXD001165 is an original dataset announced via ProteomeXchange.

Title	Hendra virus infection of bat (Pteropus alecto) and human cells
Description	SILAC labeled human kidney cells (293 cells) or bat kidney cells (PakiT03cells)were infected with Hendra virus for 8 or 24 hours and compared to uninfected control cells. Protein identification and quantitation relied on a combination of Uniprot lists of proteins and Proteomics Informed by Transcriptomics (PIT) analysis whereby RNA extracted from the same samples was deep sequenced and the sequencing data was used to construct mRNA from which possible ORFS were inferred and used as a search space by MaxQuant.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:06:29.288.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	David Matthews
SpeciesList	scientific name: Hendra virus (isolate Horse/Autralia/Hendra/1994); NCBI TaxID: 928303; scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Pteropus alecto (Black flying fox); NCBI TaxID: 9402;
ModificationList	6x(13)C; 6x(13)C labeled residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2014-07-22 06:55:16	ID requested
1	2014-11-05 07:22:09	announced
⏵ 2	2024-10-22 04:06:29	announced	2024-10-22: Updated project metadata.

Dataset with its publication pending

curator keyword: Biological, Biomedical

submitter keyword: Human Pteropus alecto Hendra virus orbitrap velos

David A Matthews
contact affiliation	School of Cellular and Molecular Medicine, University Walk, Bristol BS8 1TD
contact email	d.a.matthews@bristol.ac.uk
lab head
David Matthews
contact affiliation	University of Bristol
contact email	d.a.matthews@bristol.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/11/PXD001165

PRIDE project URI

• PRIDE
  1. PXD001165
     1. Label: PRIDE project
     2. Name: Hendra virus infection of bat (Pteropus alecto) and human cells