PXD000835-1

PXD000835 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Pacific Oyster Ctenidia Proteomics
Description	Pacific oysters (Crassostrea gigas) were exposed to either 400 µatm (control) or 2800 µatm (ocean acidification) of pCO2 for 1 month. At the end of 1 month, half of the oysters from each pCO2 treatment were subjected to an additional mechanical stimulation. Gill (ctenidia) tissue was excised from 4 oysters from each of 4 treatments - 400 and 2800 µatm with and without mechanical stimulation. Tandem mass spectrometry was performed on all 16 samples on a LTQ Orbitrap XL with 3 technical replicates per biological sample.
HostingRepository	PRIDE
AnnounceDate	2014-05-15
AnnouncementXML	Submission_2014-05-15_03:33:26.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Emma Timmins-Schiffman
SpeciesList	scientific name: Crassostrea gigas (Pacific oyster) (Crassostrea angulata); NCBI TaxID: 29159;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2014-03-17 03:41:10	ID requested
⏵ 1	2014-05-15 03:33:27	announced
2	2014-07-24 05:15:25	announced	Updated project metadata.
3	2024-10-22 04:20:13	announced	2024-10-22: Updated project metadata.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Pacific oyster, ocean acidification

submitter keyword: Pacific oyster, ocean acidification

Contact List

Steven Roberts
contact affiliation	School of Aquatic and Fishery Sciences, University of Washington, Seattle, WA, USA
contact email	sr320@uw.edu
lab head
Emma Timmins-Schiffman
contact affiliation	University of Washington
contact email	emsie25@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/05/PXD000835
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/05/PXD000835

PRIDE project URI

Repository Record List

[ + ]