⮝ Full datasets listing
PXD000673-4
PXD000673 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Psychroflexus torquis 1D LC/MS |
| Description | Proteorhodopsin has been an ongoing hot topic for the past decade. However the complete physiological role of this extremely widely distributed protein remains mysterious. In this study we aim to give an insight to the physiology of a proteorhodopsin-containing sea ice bacteria – Psychroflexus torquis using gel-free label-free proteomic approach for the first time. We also addressed the life strategy that used by this organism to successfully inhabit extreme sea ice environment. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-10-22 |
| AnnouncementXML | Submission_2024-10-22_04:18:10.702.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Shi Feng |
| SpeciesList | scientific name: Psychroflexus torquis (strain ATCC 700755 / ACAM 623); NCBI TaxID: 313595; |
| ModificationList | iodoacetamide derivatized residue |
| Instrument | LTQ Orbitrap |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2014-01-08 02:45:24 | ID requested | |
| 1 | 2015-07-24 08:38:17 | announced | |
| 2 | 2018-02-14 00:53:27 | announced | Updated project metadata. |
| 3 | 2018-02-14 02:00:53 | announced | Updated project metadata. |
| ⏵ 4 | 2024-10-22 04:18:11 | announced | 2024-10-22: Updated project metadata. |
Publication List
Keyword List
| curator keyword: Biological |
| submitter keyword: salinity, proteorhodopsin, sea ice, 1D LC/MS,Psychroflexus torquis |
Contact List
| John Philip Bowman | |
|---|---|
| contact affiliation | Food Safety Centre, Tasmanian Institute of Agriculture, University of Tasmania, Sandy Bay, Hobart, Tasmania, Australia |
| contact email | john.bowman@utas.edu.au |
| lab head | |
| Shi Feng | |
| contact affiliation | Food Safety Centre |
| contact email | sfeng@utas.edu.au |
| dataset submitter | |
Full Dataset Link List
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/07/PXD000673 |
| PRIDE project URI |
Repository Record List
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