PXD000076 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Shortgun Proteomic analysis of two Bartonella quintana strains |
Description | Proteomic analysis two strains of Bartonella quintana using In-solution digestion followed by Stron Cation Exchange (SCX) and RP nano-LC-MS/MS |
HostingRepository | PRIDE |
AnnounceDate | 2013-06-03 |
AnnouncementXML | Submission_2013-06-03_06:40:02.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD000076 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Shibu Krishnan |
SpeciesList | scientific name: Bartonella quintana (Rochalimaea quintana); NCBI TaxID: 803; scientific name: Bartonella quintana JK 31; NCBI TaxID: 1134506; |
ModificationList | monohydroxylated residue; neutral loss: 63.998285; iodoacetamide derivatized residue |
Instrument | mass analyzer type |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2012-11-28 06:42:03 | ID requested | |
1 | 2013-06-03 04:31:54 | announced | |
1 | 2014-07-28 00:25:42 | announced | |
⏵ 2 | 2013-06-03 06:40:02 | announced | Add reference |
Publication List
Fabietti A, Gaspari M, Krishnan S, Quirino A, Liberto MC, Cuda G, Foc, à A, Shotgun proteomic analysis of two Bartonella quintana strains. Proteomics, 13(8):1375-8(2013) [pubmed] |
Keyword List
submitter keyword: Bartonella quintana, JK 31, LC-MSMS |
Contact List
Dr. Alessandra Fabietti |
contact attribute | alessandra.bio@tiscali.it |
contact affiliation | University Magna Graecia of Catanzaro |
contact email | alessandra.bio@tiscali.it |
Shibu Krishnan |
contact affiliation | Laboratory of Proteomics and Mass spectrometry, University Magna Graecia of Catanzaro, Italy |
contact email | kshibu@gmail.com |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/2013/06/PXD000076 |
Repository Record List
[ + ]
[ - ]
- PRIDE
- 27965
- InstrumentRef: INSTRUMENT_1
- Label: Strain JK31; Third replicate
- ModificationList: monohydroxylated residue, neutral loss, iodoacetamide derivatized residue,
- Name: Bartonella quintana - Strain JK31; Third replicate
- PublicationRef: PMID23450663
- 27968
- InstrumentRef: INSTRUMENT_1
- Label: Strain Oklahoma; Second replicate
- ModificationList: monohydroxylated residue, neutral loss, iodoacetamide derivatized residue,
- Name: Bartonella quintana - Strain Oklahoma; Second replicate
- PublicationRef: PMID23450663
- 27964
- InstrumentRef: INSTRUMENT_1
- Label: Strain JK31; Second replicate
- ModificationList: monohydroxylated residue, neutral loss, iodoacetamide derivatized residue,
- Name: Bartonella quintana - Strain JK31; Second replicate
- PublicationRef: PMID23450663
- 27966
- InstrumentRef: INSTRUMENT_1
- Label: Strain JK31; Total
- ModificationList: monohydroxylated residue, neutral loss, iodoacetamide derivatized residue,
- Name: Bartonella quintana - Strain JK31; Total
- PublicationRef: PMID23450663
- 27969
- InstrumentRef: INSTRUMENT_1
- Label: Strain Oklahoma; Third replicate
- ModificationList: monohydroxylated residue, neutral loss, iodoacetamide derivatized residue,
- Name: Bartonella quintana - Strain Oklahoma; Third replicate
- PublicationRef: PMID23450663
- 27967
- InstrumentRef: INSTRUMENT_1
- Label: Strain Oklahoma; First replicate
- ModificationList: monohydroxylated residue, neutral loss, iodoacetamide derivatized residue,
- Name: Bartonella quintana - Strain Oklahoma; First replicate
- PublicationRef: PMID23450663
- 27963
- InstrumentRef: INSTRUMENT_1
- Label: Bartonella quintana - Strain JK31; first replicate-Nov-2012
- ModificationList: monohydroxylated residue, neutral loss, iodoacetamide derivatized residue,
- Name: Bartonella quintana Shortgun analysis using LC-MS/MS
- PublicationRef: PMID23450663
- 27970
- InstrumentRef: INSTRUMENT_1
- Label: Strain Oklahoma; Total
- ModificationList: monohydroxylated residue, neutral loss, iodoacetamide derivatized residue,
- Name: Bartonella quintana - Strain Oklahoma; Total
- PublicationRef: PMID23450663