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PXD000055-2

PXD000055 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleCasein Kinase 1 functions in eukaryotic non-transcriptional time keeping
DescriptionProteomics section: 300ug of rotein extract from Ostreococcus tauri cells were reduced alkylated and trypsin digested. Phosphopeptide enrichment done on a Titanium dioxide column. LC-MS analysis performed on a cap-HPLC-MS (Orbitrap XL). Data analysis: Data were searched using Mascot. Peptide quantitation performed with Progenesis. Position of the phosphorylated amino acid confirmed with Maxquant and manual validation.
HostingRepositoryPRIDE
AnnounceDate2024-10-07
AnnouncementXMLSubmission_2024-10-07_08:43:59.972.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD000055
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterThierry Le Bihan
SpeciesList scientific name: Ostreococcus tauri; NCBI TaxID: 70448;
ModificationListphosphorylated residue; acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
InstrumentLTQ Orbitrap
Dataset History
RevisionDatetimeStatusChangeLog Entry
02012-10-18 08:46:14ID requested
12015-09-15 05:02:43announced
22024-10-07 08:44:00announced2024-10-07: Updated project metadata.
Publication List
Kon, í, ckov, á Z, Mat, ĕ, j, í, cek V, Vrabec R, Methodic experience with determination of endotoxin in the serum. Acta Chir Plast, 15(3):170-5(1973) [pubmed]
10.6019/PXD000055;
Keyword List
submitter keyword: circadian rhythm,Phosphoproteomics, casein kinase 1, label-free quantitative analysis, Ostreococcus tauri
Contact List
Thierry Le Bihan
contact affiliationSynthSys – Synthetic and Systems Biology
contact emailthierry.lebihan@ed.ac.uk
lab head
Thierry Le Bihan
contact affiliationSynthSys – Synthetic and Systems Biology
contact emailthierry.lebihan@ed.ac.uk
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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