RPXD006668.2-1

RPXD006668.2 is a reanalysis of an original dataset. All reanalyses under this identifier are organized under a container with general attributes common to all reanalyses. Other reanalyses (if any) may be accessed by viewing the top-level container. Note that there may also be multiple revisions of each reanalysis, generally to correct errors.

[View Reanalysis Container RPXD006668]

Title	[CCMS RPXD] PRIDE PXD000561 - A draft map of the human proteome
Description	CCMS reanalysis of source datasets: PXD000561 Click MSV000079514 to see all reanalysis results. The availability of human genome sequence has transformed biomedical research over the past decade. However, an equivalent map for the human proteome with direct measurements of proteins and peptides does not exist yet. Here, we report a draft map of the human proteome based on high resolution Fourier transform mass spectrometry-based proteomics technology. In-depth proteomic profiling of 30 histologically normal human samples including 17 adult tissues, 7 fetal tissues and 6 purified primary hematopoietic cells resulted in identification of proteins encoded by greater than 17,000 genes accounting for ~84% of the total annotated protein-coding genes in humans. This large human proteome catalog (available as an interactive web-based resource at http://www.humanproteomemap.org) will complement available human genome and transcriptome data to accelerate biomedical research in health and disease. The authors request that those considering use of this dataset for commercial purposes contact pandey@jhmi.edu.
HostingRepository	MassIVE
AnnounceDate	2017-06-06
AnnouncementXML	Submission_2017-06-06_15:15:51.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Reanalysis of MSV000079514
RepositorySupport	Supported dataset by repository
PrimarySubmitter	CCMS System
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	acetylated residue; iodoacetamide derivatized residue; L-methionine sulfoxide
Instrument	LTQ Orbitrap Velos; LTQ Orbitrap Elite

Reanalysis	Revision	Datetime	Status	Title / ChangeLog Entry
2	1	2017-06-06 15:15:52	announced	[CCMS RPXD] PRIDE PXD000561 - A draft map of the human proteome CCMS reanalysis: Reanalysis of MSV000079514 - Spectral Library Creation Search - HCD Human Submitted by CCMS System

no publication

submitter keyword: MassIVE, reanalysis

CCMS System
contact affiliation	CCMS
contact email	ccms@proteomics.ucsd.edu
lab head

MassIVE dataset URI

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