PXD041124 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Easy, robust, and reproducible online acid cleavage of proteins in mobile phase for fast quantitative LC-MS bottom-up proteomics – application for ricin detection |
Description | The data were recorded during the development, optimization, and characterization of a method for fast online acid cleavage of proteins directly in the mobile phase. |
HostingRepository | PRIDE |
AnnounceDate | 2023-10-24 |
AnnouncementXML | Submission_2023-10-24_12:30:59.568.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | JurajLenco |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Ricinus communis; NCBI TaxID: 3988; |
ModificationList | dehydrated residue; monohydroxylated residue; formylated residue |
Instrument | Q Exactive HF-X |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2023-03-27 02:56:29 | ID requested | |
⏵ 1 | 2023-10-24 12:31:00 | announced | |
2 | 2023-11-14 09:09:43 | announced | 2023-11-14: Updated project metadata. |
Publication List
Naplekov DK, Jadeja S, Fu, č, í, kov, á AM, Š, vec F, Sklen, á, ř, ov, á H, Len, č, o J, Application for Ricin Detection. Anal Chem, 95(33):12339-12348(2023) [pubmed] |
Keyword List
submitter keyword: bottom-up proteomics |
LC-MS |
online protein cleavage |
acid hydrolysis |
aspartic acid |
ricin |
artifacts |
Contact List
JurajLenco |
contact affiliation | Charles University, Faculty of Pharmacy in Hradec Králové Department of Analytical Chemistry Akademika Heyrovského 1203/8 500 05 Hradec Králové, Czech Republic |
contact email | lenco@faf.cuni.cz |
lab head | |
JurajLenco |
contact affiliation | Faculty of Pharmacy, Charles University |
contact email | lenco@faf.cuni.cz |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD041124 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD041124
- Label: PRIDE project
- Name: Easy, robust, and reproducible online acid cleavage of proteins in mobile phase for fast quantitative LC-MS bottom-up proteomics – application for ricin detection