PXD041124

PXD041124 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Easy, robust, and reproducible online acid cleavage of proteins in mobile phase for fast quantitative LC-MS bottom-up proteomics – application for ricin detection
Description	The data were recorded during the development, optimization, and characterization of a method for fast online acid cleavage of proteins directly in the mobile phase.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_09:09:41.502.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Juraj Lenco
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Ricinus communis; NCBI TaxID: 3988;
ModificationList	dehydrated residue; monohydroxylated residue; formylated residue
Instrument	Q Exactive HF-X

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2023-03-27 02:56:29	ID requested
1	2023-10-24 12:31:00	announced
⏵ 2	2023-11-14 09:09:43	announced	2023-11-14: Updated project metadata.

Publication List

Naplekov DK, Jadeja S, Fu, č, í, kov, á AM, Š, vec F, Sklen, á, ř, ov, á H, Len, č, o J, Application for Ricin Detection. Anal Chem, 95(33):12339-12348(2023) [pubmed]

Naplekov DK, Jadeja S, Fu, č, í, kov, á AM, Š, vec F, Sklen, á, ř, ov, á H, Len, č, o J, Application for Ricin Detection. Anal Chem, 95(33):12339-12348(2023) [pubmed]

Keyword List

submitter keyword: bottom-up proteomics
LC-MS
online protein cleavage
acid hydrolysis
aspartic acid
ricin
artifacts

submitter keyword: bottom-up proteomics

LC-MS

online protein cleavage

acid hydrolysis

aspartic acid

ricin

artifacts

Contact List

Juraj Lenco
contact affiliation	Charles University, Faculty of Pharmacy in Hradec Králové Department of Analytical Chemistry Akademika Heyrovského 1203/8 500 05 Hradec Králové, Czech Republic
contact email	lenco@faf.cuni.cz
lab head
Juraj Lenco
contact affiliation	Faculty of Pharmacy, Charles University
contact email	lenco@faf.cuni.cz
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD041124
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD041124

PRIDE project URI

Repository Record List

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