PXD036384

PXD036384 is an original dataset announced via ProteomeXchange.

Title	The proteomics for the flower, fruit, stem, leaf, and plantlets of Camptotheca acuminata during the vigorous period for camptothecin metabolism.
Description	We used a proteomics-guided approach to identify and annotate the proteins enriched in the vigorous camptothecin metabolism period. For transition library construction, shotgun proteomics analyses were performed using Evosep One UHPLC system coupled with a Q ExactiveTM HF-X mass spectrometer operating in the data-dependent acquisition and data-independent acquisitionmode. The resulting spectra from each fraction were searched separately against the genome database of C. acuminata by the search engines: Proteome Discoverer software (version 2.2). The search parameters were set as follows: mass tolerance for precursor ion was 10 ppm and mass tolerance for product ion was 0.02 Da. The result of search and identification by PD 2.2 software was imported into Spectronaut software (version 14.0) to generate a library.
HostingRepository	iProX
AnnounceDate	2022-08-29
AnnouncementXML	Submission_2023-01-03_02:01:34.556.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Xiang Pu
SpeciesList	scientific name: Camptotheca acuminata; NCBI TaxID: 16922;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF-X

Revision	Datetime	Status	ChangeLog Entry
0	2022-08-29 01:32:22	ID requested
⏵ 1	2023-01-03 02:01:34	announced

Dataset with its publication pending

submitter keyword: Camptotheca acuminata, flower, fruit, stem, leaf, plantlets, proteomics

Xiang Pu
contact affiliation	Sichuan Agricultural University
contact email	puxiang@sicau.edu.cn
lab head
Xiang Pu
contact affiliation	Sichuan Agricultural University
contact email	puxiang@sicau.edu.cn
dataset submitter

iProX dataset URI