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PXD033586-1

PXD033586 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleThe marine Bacteroidetes Muricauda sp. MAR_2010_75 digests diatom β-mannan
DescriptionThe polysaccharide β-mannan, which is common in terrestrial plants but unknown in microalgae, was recently detected during diatom blooms. We identified a β-mannan polysaccharide utilization locus (PUL) in the genome of the marine Flavobacterium Muricauda sp. MAR_2010_75 which resembles PULs in bacteria from diverse ecosystems. Proteomics showed the β-mannan induced translation of 22 proteins encoded within the PUL.
HostingRepositoryPRIDE
AnnounceDate2022-11-24
AnnouncementXMLSubmission_2022-11-24_05:34:39.463.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterIrenaBeidler
SpeciesList scientific name: Muricauda sp. MAR_2010_75; NCBI TaxID: 1250232;
ModificationListmonohydroxylated residue
InstrumentLTQ Orbitrap
Dataset History
RevisionDatetimeStatusChangeLog Entry
02022-05-04 09:14:16ID requested
12022-11-24 05:34:39announced
Publication List
Keyword List
submitter keyword: Marine Bacteroidetes, Polysaccharide degradation, Muricauda,β-mannan, Subproteome
Contact List
ThomasSchweder
contact affiliationUniversity of Greifswald, Insititute of Pharmacy, Department Pharmaceutical Biotechnology
contact emailschweder@uni-greifswald.de
lab head
IrenaBeidler
contact affiliationUniversity of Greifswald, Department Pharmaceutical Biotechnology
contact emailirena.beidler@uni-greifswald.de
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
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