PXD032163

PXD032163 is an original dataset announced via ProteomeXchange.

Title	Proteomic analysis response of rice (Oryza sativa) leaves to ultravoilet (UV-B) stress
Description	Rice (Oryza staiva) is staple food for the human consumption and model plants for genetic and molecular studies. Only few studies have been conducted on ultraviolet-B (UV-B) stress on rice. UV-B stress effects different morphological and physiological changes in plants. However, underlying mechanisms governing these integrated responses are unknown. In this study, we conducted proteomic response of rice leaves to UV-B stress using two-dimensional gel electrophoresis and identified the selected proteins by mass spectrometry analysis. To identify changes in protein accumulation in response to UV-B stress, two cultivars, i.e., IR6 and REX were irradiated by artificial UV-B radiation. Four 4 levels of daily biologically effective UV-B radiation intensities, 0 (control), 5, 10, and 15 kJ m-2 d-1 were imposed. We conducted this experiment in Sunlit Soil-Plant-Atmosphere-Research (SPAR) chambers to mimic the natural environment.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_07:48:31.732.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Saroj Sah
SpeciesList	scientific name: Oryza sativa subsp. japonica (Rice); NCBI TaxID: 39947; scientific name: O. sativa Indica Group; NCBI TaxID: 39946;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap Velos Pro

Revision	Datetime	Status	ChangeLog Entry
0	2022-03-09 02:33:54	ID requested
1	2022-10-14 15:07:31	announced
⏵ 2	2023-11-14 07:48:36	announced	2023-11-14: Updated project metadata.

Sah SK, Jumaa S, Li J, Reddy KR, ) leaves to ultraviolet-B radiation stress. Front Plant Sci, 13():871331(2022) [pubmed]

submitter keyword: Oryza sativa, leaves, mass spectrometry, two dimensional gel electrophoresis, ultraviolet-B stress

Jiaxu Li
contact affiliation	Department of Biochemistry, Molecular Biology, Entomology, and Plant Pathology, Mississippi State University, Box 9655, Mississippi State, MS 39762, USA.
contact email	jl305@bch.msstate.edu
lab head
Saroj Sah
contact affiliation	Brookhaven National Laboratory
contact email	saroj1021@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD032163

PRIDE project URI

• PRIDE
  1. PXD032163
     1. Label: PRIDE project
     2. Name: Proteomic analysis response of rice (Oryza sativa) leaves to ultravoilet (UV-B) stress