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PXD031213-1

PXD031213 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleTranscriptome innovations in primates revealed by single-molecule long-read sequencing
DescriptionWe produced an extensive transcript catalog for LCLs of 5 primate species by leveraging isoform sequencing and short-read RNA-seq. The curated transcriptomes were used to assist mass spectrometry protein identifications.
HostingRepositoryPRIDE
AnnounceDate2022-05-31
AnnouncementXMLSubmission_2022-05-31_02:15:46.566.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterLuis Ferrández
SpeciesList scientific name: Pan troglodytes (Chimpanzee); NCBI TaxID: 9598; scientific name: Pongo pygmaeus (Bornean orangutan); NCBI TaxID: 9600; scientific name: Gorilla gorilla; NCBI TaxID: 9593; scientific name: Macaca mulatta (Rhesus macaque); NCBI TaxID: 9544; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListTMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
InstrumentOrbitrap Fusion Lumos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02022-01-25 00:35:44ID requested
12022-05-31 02:15:46announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: primates,LCLs,proteomics,isoforms,Iso-seq
Contact List
Tomàs Marquès Bonet
contact affiliationComparative Genomics lab - Institute of Evolutionary Biology (IBE) Barcelona (Spain)
contact emailtomas.marques@upf.edu
lab head
Luis Ferrández
contact affiliationIBE
contact emailluis.ferrandez@upf.edu
dataset submitter
Full Dataset Link List
Dataset FTP location
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