PXD031035
PXD031035 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Mass spectrometry to exam noval receptors of the The Omicron Variant of SARS-CoV-2 RBD captured by SPIDER |
| Description | We used SPIDER to examine the cell-surface receptors for specific ligands while these receptors were in their native membranes within intact cells in culture. Here we coupled the SPIDER assay with biotinylated RBD of the Omicron Variant of SARS-CoV-2 and biotinylated RBD of SARS-CoV-2. Then we performed mass spectrometry strategy to identify novel binding proteins on the surface of VERO E6,Calu-3,and H1299 cells. |
| HostingRepository | iProX |
| AnnounceDate | 2022-01-18 |
| AnnouncementXML | Submission_2023-04-24_19:46:14.685.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Yoyo Wang |
| SpeciesList | scientific name: Chlorocebus sabaeus; NCBI TaxID: 60711; scientific name: Homo sapiens; NCBI TaxID: 9606; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Q Exactive Plus |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2022-01-17 18:15:18 | ID requested | |
| 1 | 2022-01-17 18:15:45 | announced | |
| ⏵ 2 | 2023-04-24 19:46:17 | announced | 2023-04-25: Update publication information. |
Publication List
| Jiang HW, Chen H, Zheng YX, Wang XN, Meng Q, Xie J, Zhang J, Zhang C, Xu ZW, Chen ZQ, Wang L, Kong WS, Zhou K, Ma ML, Zhang HN, Guo SJ, Xue JB, Hou JL, Liu ZY, Niu WX, Wang FJ, Wang T, Li W, Wang RN, Dang YJ, Czajkowsky DM, Pei J, Dong JJ, Tao SC, Specific pupylation as IDEntity reporter (SPIDER) for the identification of protein-biomolecule interactions. Sci China Life Sci, 66(8):1869-1887(2023) [pubmed] |
Keyword List
| submitter keyword: Human proteome, cell surface proteins (VERO E6 [Chlorocebus sabaeus], Calu-3, H1299) |
Contact List
| Shengce Tao | |
|---|---|
| contact affiliation | Shanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University |
| contact email | taosc@sjtu.edu.cn |
| lab head | |
| Yoyo Wang | |
| contact affiliation | Shanghai Jiao Tong University |
| contact email | wxnyoyo@sjtu.edu.cn |
| dataset submitter | |
Full Dataset Link List
| iProX dataset URI |
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