PXD029284
PXD029284 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | Metaproteomic analysis of gut microbiota from 30 samples of cystic fibrosis infants |
Description | The link between human gut microbiota (a complex group of microorganisms including not only bacteria but also fungi, viruses, etc.,) and the physiological state is nowadays unquestionable. Metaproteomic has emerged as a useful technique to characterize this microbial community, not just taxonomically, but also focusing on specific biological processes carried out by gut microbiota that may have an effect in the host health or pathological state. Cystic fibrosis is a genetic disease in which the microbiota of the respiratory tract determines the patient's survival and differences in composition of gut microbiota of cystic fibrosis patients respect to healthy infants have been reported. In order to characterize this host-microbiota inter-relation, we carried out the metaproteomic study of 30 stool samples from infants with cystic fibrosis. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_09:05:20.198.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Concha Gil |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2021-10-22 06:56:36 | ID requested | |
1 | 2022-10-11 09:21:27 | announced | |
2 | 2023-09-25 03:21:30 | announced | 2023-09-25: Updated project metadata. |
⏵ 3 | 2023-11-14 09:05:21 | announced | 2023-11-14: Updated project metadata. |
Publication List
Saralegui C, Garc, í, a-Dur, á, n C, Romeu E, Hern, á, ez-S, á, nchez ML, Maruri A, Bast, ó, n-Paz N, Lamas A, Vicente S, P, é, rez-Ruiz E, Delgado I, Luna-Paredes C, Caballero JD, Zamora J, Monteoliva L, Gil C, Del Campo R, Statistical Evaluation of Metaproteomics and 16S rRNA Amplicon Sequencing Techniques for Study of Gut Microbiota Establishment in Infants with Cystic Fibrosis. Microbiol Spectr, 10(6):e0146622(2022) [pubmed] |
Keyword List
submitter keyword: microbial functions, cystic fibrosis,Metaproteomics, human proteins, gut microbiota |
Contact List
Concha Gil | |
---|---|
contact affiliation | Departamento de Microbiología II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain |
contact email | conchagil@ucm.es |
lab head | |
Concha Gil | |
contact affiliation | UCM |
contact email | cai.proteomica@pas.ucm.es |
dataset submitter |
Full Dataset Link List
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD029284 |
PRIDE project URI |
Repository Record List
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