<<< Full experiment listing


PXD027141 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleOrgan wise proteomic profiling of Indian major carp, Labeo rohita
DescriptionThe aim of this study was to develop an organ wise proteome map for Labeo rohita. Using LC-MS/MS, we have performed in-depth proteomics analysis of 19 different sample types, including 17 tissue samples, plasma from female fish and embryo 4-day post fertilization. Whole analysis resulted in the identification of more than more than 8000 proteins with 1% FDR of which more than 76% were identified with two or more than two unique peptides. The dataset show organ wise pattern of protein expression along with extensive catalogue of orgsn wise Post translational modification. This proteomic information would complement the recently published genome to accelerate further research.
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterMehar Un Nissa
SpeciesList scientific name: Labeo rohita; NCBI TaxID: 84645;
ModificationListNo PTMs are included in the dataset
InstrumentOrbitrap Fusion
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-07-07 01:37:29ID requested
12022-01-13 01:55:54announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: Labeo rohita, proteomics, expression, rohu
Contact List
Sanjeeva Srivastava
contact affiliationDepartment of Biosciences and bioengineering, IIT Bombay, India, 400076
contact emailsanjeeva@iitb.ac.in
lab head
Mehar Un Nissa
contact affiliationIndian Institute of Technology Bombay
contact emailkohlimeharunnissa@gmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/01/PXD027141
PRIDE project URI
Repository Record List
[ + ]