PXD027141

PXD027141 is an original dataset announced via ProteomeXchange.

Title	Organ wise proteomic profiling of Indian major carp, Labeo rohita
Description	The aim of this study was to develop an organ wise proteome map for Labeo rohita. Using LC-MS/MS, we have performed in-depth proteomics analysis of 19 different sample types, including 17 tissue samples, plasma from female fish and embryo 4-day post fertilization. Whole analysis resulted in the identification of more than more than 8000 proteins with 1% FDR of which more than 76% were identified with two or more than two unique peptides. The dataset show organ wise pattern of protein expression along with extensive catalogue of orgsn wise Post translational modification. This proteomic information would complement the recently published genome to accelerate further research.
HostingRepository	PRIDE
AnnounceDate	2022-01-13
AnnouncementXML	Submission_2022-01-13_01:55:54.036.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Mehar Un Nissa
SpeciesList	scientific name: Labeo rohita; NCBI TaxID: 84645;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2021-07-07 01:37:29	ID requested
⏵ 1	2022-01-13 01:55:54	announced

Dataset with its publication pending

submitter keyword: Labeo rohita, proteomics, expression, rohu

Sanjeeva Srivastava
contact affiliation	Department of Biosciences and bioengineering, IIT Bombay, India, 400076
contact email	sanjeeva@iitb.ac.in
lab head
Mehar Un Nissa
contact affiliation	Indian Institute of Technology Bombay
contact email	kohlimeharunnissa@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/01/PXD027141

PRIDE project URI

• PRIDE
  1. PXD027141
     1. Label: PRIDE project
     2. Name: Organ wise proteomic profiling of Indian major carp, Labeo rohita