PXD025969

PXD025969 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Quantitative Proteomic and Phosphoproteomic profilings of two foxtail millet cultivars under salinity
Description	In this project, comprehensive proteomic and phosphoproteomic analysis was performed to explore sophisticated responsive networks of foxtail millet varieties of An04 and Yugu2 under salinity. Isobaric tags for relative and absolute quantitation-based (iTRAQ) and tandem mass tags-based (TMTs) quantitative proteomics approaches were used. In total, 10366 sites corresponding to 2862 proteins were detected and quantified. There were 759 and 990 sites corresponding to 484 and 633 proteins identified under salinity in An04 and Yugu2, respectively, and 1264 and 1131 phosphorylation sites corresponding to 789 and 731 proteins were identified between these two varieties before and after salt stress, respectively.
HostingRepository	PRIDE
AnnounceDate	2022-02-17
AnnouncementXML	Submission_2022-02-17_03:29:14.360.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	li zhen
SpeciesList	scientific name: Setaria italica; NCBI TaxID: 4555;
ModificationList	phosphorylated residue
Instrument	Q Exactive Plus

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-05-12 01:46:07	ID requested
⏵ 1	2022-02-17 03:29:15	announced

Publication List

Pan J, Li Z, Wang Q, Guan Y, Li X, Huangfu Y, Meng F, Li J, Dai S, Liu W, Phosphoproteomic Profiling Reveals Early Salt-Responsive Mechanisms in Two Foxtail Millet Cultivars. Front Plant Sci, 12():712257(2021) [pubmed]

Pan J, Li Z, Wang Q, Guan Y, Li X, Huangfu Y, Meng F, Li J, Dai S, Liu W, Phosphoproteomic Profiling Reveals Early Salt-Responsive Mechanisms in Two Foxtail Millet Cultivars. Front Plant Sci, 12():712257(2021) [pubmed]

Keyword List

submitter keyword: Foxtail millet (Setaria italica)
Salt stress
Proteomic and phosphoproteomic
Phosphorylation
LC-MS/MS

submitter keyword: Foxtail millet (Setaria italica)

Salt stress

Proteomic and phosphoproteomic

Phosphorylation

LC-MS/MS

Contact List

Liu Wei
contact affiliation	Shandong Academy of Agricultural Sciences
contact email	wheiliu@163.com
lab head
li zhen
contact affiliation	Shandong Academy of Agricultural Sciences
contact email	lizhen1891@126.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD025969
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD025969

PRIDE project URI

Repository Record List

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