<<< Full experiment listing

PXD023124-1

PXD023124 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleNucleotide sugar biosynthesis occurs in the glycosomes of procyclic and bloodstream form Trypanosoma brucei
DescriptionIn Trypanosoma brucei, there are fourteen enzymatic biotransformations that collectively convert glucose into five essential nucleotide sugars: UDP-Glc, UDP-Gal, UDP-GlcNAc, GDP-Man and GDP-Fuc. These biotransformations are catalyzed by thirteen discrete enzymes, five of which possess putative peroxisome targeting sequences. Published experimental analyses using immunofluorescence microscopy and/or digitonin latency and/or subcellular fractionation and/or organelle proteomics have localized eight and six of these enzymes to the glycosomes of bloodstream form and procyclic form T. brucei, respectively. Here we increase these glycosome localizations to eleven in both lifecycle stages while noting that one, phospho-N-acetylglucosamine mutase, also localizes to the cytoplasm. In the course of these studies, the heterogeneity of glycosome contents was also noted. These data suggest that, unlike other eukaryotes, all of nucleotide sugar biosynthesis in T. brucei is compartmentalized to the glycosomes in both lifecycle stages.
HostingRepositoryPRIDE
AnnounceDate2021-03-04
AnnouncementXMLSubmission_2021-03-04_11:03:18.203.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterMichele Tinti
SpeciesList scientific name: Trypanosoma brucei; NCBI TaxID: 5691;
ModificationListacetylated residue; iodoacetamide derivatized residue; deamidated residue
InstrumentLTQ Orbitrap Velos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-12-14 06:44:59ID requested
12021-03-04 11:03:18announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: nucleotide sugar biosynthesis, glycosome localization, t. brucei
Contact List
Mike Ferguson
contact affiliationBiological Chemistry and Drug Discovery Wellcome Centre for Anti-Infectives Research (WCAIR)
contact emailm.a.j.ferguson@dundee.ac.uk
lab head
Michele Tinti
contact affiliationDundee University
contact emailm.tinti@dundee.ac.uk
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/01/PXD023124
PRIDE project URI
Repository Record List
[ + ]