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PXD022796-1

PXD022796 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleTowards predicting the fate of reef corals
DescriptionAn iTRAQ approach was used to characterize the proteomes of reef corals (Orbicella faveolata) and their dinoflagellate endosymbionts (family Symbiodiniaceae) from a short-term (one month) thermal stress experiment. Please note that the same protein sample was labeled with the 113 tag and run in each batch (A, B, and C in the file names) to serve as an internal control aimed at limiting bias associated with batch-to-batch variation. As such, although 24 samples were analyzed (8-plex iTRAQ was used), only 21 of these reflect actual experimental coral samples. Please see the attached Word and Excel files to match the batch and tag with the experimental samples. Note that one sample (B5-7; iTRAQ batch A-label 114; a control coral sampled after five treatment days) spilled in the speed-vac during preparation and so was not analyzed, resulting in a final sample size of 20.
HostingRepositoryMassIVE
AnnounceDate2021-09-28
AnnouncementXMLSubmission_2021-09-28_08:53:17.197.xml
DigitalObjectIdentifier
ReviewLevelNon peer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterAnderson B Mayfield
SpeciesList scientific name: Orbicella faveolata; NCBI TaxID: 48498; scientific name: Breviolum sp.; NCBI TaxID: 2499526; scientific name: Durusdinium sp. clade D; NCBI TaxID: 298137;
ModificationListiTRAQ8plex
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-11-27 07:54:15ID requested
12021-09-28 08:53:17announced
Publication List
no publication
Keyword List
submitter keyword: coral reefs, climate change, dinoflagellate, proteomics, predictive modeling
Contact List
Anderson Mayfield
contact affiliationUniversity of Miami
contact emailabm64@miami.edu
lab head
Anderson B Mayfield
contact affiliationNOAA
contact emailanderson.mayfield@noaa.gov
dataset submitter
Full Dataset Link List
MassIVE dataset URI
Dataset FTP location
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