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PXD022307-2

PXD022307 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleArabidopsis membrane protein phosphoproteomics in early cold response
DescriptionCold stress is one of the major limiting factors for global crop production. For survival at low temperature, plants need to sense the temperature changes in the surrounding environment. How plants sense and respond to the earliest drop in temperature is still not clearly understood. The plasma membrane and its adjacent extracellular and cytoplasmic sites are the first checkpoints for sensing temperature changes and subsequent events such as signal generation and solute transport. To understand how plants respond to early cold exposure, cold responsive phosphoproteins should be understood. Phosphoproteomic analysis was carried out by using following process. Microsomal membrane fraction was extracted from cold exposed leaves. Trypsin digestion and phosphopeptide enrichment by HAMMOC method were performed, then purified peptide sample was analyzed by TripleTOF5600 (AB-SCIEX).
HostingRepositoryjPOST
AnnounceDate2021-10-30
AnnouncementXMLSubmission_2022-09-18_04:06:38.554.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD022307
ReviewLevelNon peer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterMd Mostafa Kamal
SpeciesList scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationListS-carboxamidomethyl-L-cysteine; L-methionine sulfoxide; O-phospho-L-serine; O-phospho-L-threonine; O4'-phospho-L-tyrosine
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-11-02 23:12:19ID requested
12021-10-29 08:00:05announced
22022-09-18 04:06:38announced2022-09-18: Updated FTP location.
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: Arabidopsis, cold response, membrane phosphoproteomics, stress perception, stress signaling, cold stress
Contact List
Matsuo Uemura
lab head
Md Mostafa Kamal
contact affiliationFaculty of Agriculture, Iwate University, Japan
dataset submitter
Full Dataset Link List
jPOST dataset URI
Dataset FTP location
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