<<< Full experiment listing

PXD021076-1

PXD021076 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleProteomics profiling of pediatric choroid plexus tumors
DescriptionAggresome is a para nuclear inclusion body that functions as a storage compartment for misfolded proteins. Our previous work revealed the presence of aggresomes in pediatric choroid plexus tumors (CPT). CPTs are rare neoplasms comprised of three pathological subgroups; choroid plexus carcinoma (CPC), a grade III tumor, atypical choroid plexus papilloma (ACPP), a grade II tumor, and choroid plexus papilloma (CPP), a grade I tumor. In the current study, we aimed to investigate the prognostic value of aggresomes-positivity and its correlation to the pathological and molecular subtypes. The proteomics profiling of 21 CPT pediatric samples was investigated using ABSciex Triple TOF 5600+ mass spectrometer.
HostingRepositoryPRIDE
AnnounceDate2021-02-11
AnnouncementXMLSubmission_2021-02-11_01:05:49.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD021076
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterNouran Al-Shehaby
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListacetylated residue; monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-08-24 02:38:47ID requested
12021-02-11 01:05:49announced
Publication List
Dataset with its publication pending
Keyword List
ProteomeXchange project tag: Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project
submitter keyword: Human, Pediatric, Cancer, Tumor, Choroid Plexus, Tissue, Pappiloma, Atypical, Carcinoma
Contact List
Shahenda Mahmoud El-Naggar
contact affiliationTumor Biology Research Program, Basic Research Unit, Research Department, Children's Cancer Hospital Egypt 57357
contact emailshahenda.elnaggar@57357.org
lab head
Nouran Al-Shehaby
contact affiliationChildren's Cancer Hospital Egypt 57357
contact emailnouran.alshehaby@57357.org
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/02/PXD021076
PRIDE project URI
Repository Record List
[ + ]