PXD020953-2

PXD020953 is an original dataset announced via ProteomeXchange.

Title	The DIALib-QC software tool for the systematic assessment of spectral library quality in data-independent acquisition proteomics
Description	DIALib-QC (DIA library quality control) tool is used for the systematic evaluation of a spectral library’s characteristics, completeness and mass-accuracy ensuring correct identification and accurate quantitation of peptides and proteins from DIA/SWATH processing tools.
HostingRepository	PRIDE
AnnounceDate	2020-10-16
AnnouncementXML	Submission_2020-10-20_07:07:52.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Mukul Midha
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	TripleTOF 6600

Revision	Datetime	Status	ChangeLog Entry
0	2020-08-17 03:35:28	ID requested
1	2020-10-16 00:37:59	announced
⏵ 2	2020-10-20 07:07:53	announced	2020-10-20: Updated publication reference for PubMed record(s): 33067471.

Midha MK, Campbell DS, Kapil C, Kusebauch U, Hoopmann MR, Bader SL, Moritz RL, DIALib-QC an assessment tool for spectral libraries in data-independent acquisition proteomics. Nat Commun, 11(1):5251(2020) [pubmed]

submitter keyword: SWATH-MS, DIA, Spectral library, DIALib-QC

Prof. Robert L. Moritz
contact affiliation	Head of Proteomics Research, Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA
contact email	rmoritz@systemsbiology.org
lab head
Mukul Midha
contact affiliation	Institute for Systems Biology
contact email	mmidha@systemsbiology.org
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/10/PXD020953

PRIDE project URI

• PRIDE
  1. PXD020953
     1. Label: PRIDE project
     2. Name: The DIALib-QC software tool for the systematic assessment of spectral library quality in data-independent acquisition proteomics