PXD018448

PXD018448 is an original dataset announced via ProteomeXchange.

Title	Structure and function of the topsoil metaproteome across global biomes: a survey of the topsoil metaproteome across global biomes
Description	Herein, we evaluated the changes in biological functions in soils across global biomes through the identification and quantification of proteins. This knowledge is essential to provide one stepforward in soil microbial ecology in order to decipher the cellular and molecular mechanisms employed by soil microbial communities to adapt to their environment and to explain the potential responses of microbial communities, and their microbially-driven ecosystem services, to global change and land use. Our study aims to provide the most comprehensive assessment on the structure and function of the topsoil metaproteome across global biomes, and hence provide direct identification of the most domimant protein-encoded functions in terrestrial ecosystems.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:26:16.409.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nico Jehmlich
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-04-09 04:20:22	ID requested
1	2023-02-24 02:16:22	announced
⏵ 2	2023-11-14 08:26:19	announced	2023-11-14: Updated project metadata.

Fernandes MLP, Bastida F, Jehmlich N, Martinovi, ć T, V, ě, trovsk, ý T, Baldrian P, Delgado-Baquerizo M, Starke R, Functional soil mycobiome across ecosystems. J Proteomics, 252():104428(2022) [pubmed]

submitter keyword: survey,Soil metaproteomics, LC-MS, topsoil, global microbiomes

Nico Jehmlich
contact affiliation	Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15 04318 Leipzig, Germany
contact email	nico.jehmlich@ufz.de
lab head
Nico Jehmlich
contact affiliation	Helmholtz-Centre for Environmental Research - UFZ
contact email	nico.jehmlich@ufz.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/02/PXD018448

PRIDE project URI

• PRIDE
  1. PXD018448
     1. Label: PRIDE project
     2. Name: Structure and function of the topsoil metaproteome across global biomes: a survey of the topsoil metaproteome across global biomes