PXD017185-2
PXD017185 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | DIA proteomics of dried blood spot proteins by sodium carbonate |
Description | We developed a simple and sensitive analysis method for dried blood spot (DBS) proteins by sodium carbonate precipitation (SCP). We aimed to removing large amounts of hydrophilic blood proteins such as hemoglobin, albumin, fibrinogen and transferrin in DBS using a simple pretreatment with sodium carbonate solution, which concentrates membrane proteins. We evaluated the performance of the SCP method by comparing the LC-MS/MS results obtained for proteins prepared by SCP with those obtained by sodium dodecanate (SoDod) extract as total protein solubilized from DBS. |
HostingRepository | jPOST |
AnnounceDate | 2020-01-20 |
AnnouncementXML | Submission_2021-02-04_16:55:44.xml |
DigitalObjectIdentifier | |
ReviewLevel | Non peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Daisuke Nakajima |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | S-carboxamidomethyl-L-cysteine; unknown modification |
Instrument | Q Exactive HF-X |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2020-01-19 16:34:54 | ID requested | |
1 | 2020-01-19 16:34:58 | announced | |
⏵ 2 | 2021-02-04 16:55:44 | announced | 2021-02-04: Updated FTP location. |
3 | 2022-09-18 04:00:41 | announced | 2022-09-18: Updated FTP location. |
4 | 2023-01-20 16:52:55 | announced | 2023-01-21: Updated PubMed. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Dried blood spot, DIA, clinical proteomics |
Contact List
Daisuke Nakajima | |
---|---|
lab head | |
Daisuke Nakajima | |
contact affiliation | Kazusa DNA Research Institute |
dataset submitter |
Full Dataset Link List
jPOST dataset URI |
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.biosciencedbc.jp/archive/jpostrepos/JPST000735 |