PXD016049

PXD016049 is an original dataset announced via ProteomeXchange.

Title	Neutrophil Defensins (Alpha-Defensins)
Description	In the HPLC high-resolution ESI-MS profiles of Gingival Crevicular Fluid, four proteins, with exp. monoisotopic ion [M+H]+ at 3440.54 ± 0.06 m/z, 3369.50± 0.06 m/z, 3484.51 ± 0.06 m/z and 3707.77 ± 0.06, eluting between 24.5-26.6 minutes, were detected. The monoisotopic mass values and the manual inspection of the high-resolution MS/MS spectra of the ions at [M+5H]+5 at 689.31, 675.10, 698.11 and 742.76 m/z, and of the ions at [M+4H]+4 at 843.63, 872.39 m/z allowed to establish that the four proteins were alpha defensins 1, 2, 3 and 4.
HostingRepository	PRIDE
AnnounceDate	2020-07-09
AnnouncementXML	Submission_2020-07-09_02:10:21.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Federica Iavarone
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue; acetylated residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2019-10-28 07:41:59	ID requested
⏵ 1	2020-07-09 02:10:23	announced

Iavarone F, Olianas A, Patini R, Gallenzi P, Di Tonno L, Desiderio C, Cabras T, Manconi B, Vincenzoni F, Cordaro M, Messana I, Urbani A, Castagnola M, Top down proteomic analysis of gingival crevicular fluid in deciduous, exfoliating and permanent teeth in children. J Proteomics, 226():103890(2020) [pubmed]

submitter keyword: proteomics, top-down, gingival crevicular fluid

Federica Iavarone
contact affiliation	Istituto di Biochimica e Biochimica Clinica, Università Cattolica del Sacro Cuore, Roma, Italia. Fondazione Policlinico Universitario A. Gemelli IRCCS, Roma, Italia.
contact email	federica.iavarone@unicatt.it
lab head
Federica Iavarone
contact affiliation	Biochemistry and Clinical Biochemistry Institute, Medicine Faculty, Catholic University of Rome Fondazione Policlinico Universitario A. Gemelli IRCCS Rome Italy
contact email	federica.iavarone@unicatt.it
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/07/PXD016049

PRIDE project URI

• PRIDE
  1. PXD016049
     1. Label: PRIDE project
     2. Name: Neutrophil Defensins (Alpha-Defensins)