PXD016049 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Neutrophil Defensins (Alpha-Defensins) |
Description | In the HPLC high-resolution ESI-MS profiles of Gingival Crevicular Fluid, four proteins, with exp. monoisotopic ion [M+H]+ at 3440.54 ± 0.06 m/z, 3369.50± 0.06 m/z, 3484.51 ± 0.06 m/z and 3707.77 ± 0.06, eluting between 24.5-26.6 minutes, were detected. The monoisotopic mass values and the manual inspection of the high-resolution MS/MS spectra of the ions at [M+5H]+5 at 689.31, 675.10, 698.11 and 742.76 m/z, and of the ions at [M+4H]+4 at 843.63, 872.39 m/z allowed to establish that the four proteins were alpha defensins 1, 2, 3 and 4. |
HostingRepository | PRIDE |
AnnounceDate | 2020-07-09 |
AnnouncementXML | Submission_2020-07-09_02:10:21.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Federica Iavarone |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | phosphorylated residue; acetylated residue |
Instrument | LTQ Orbitrap Elite |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-10-28 07:41:59 | ID requested | |
⏵ 1 | 2020-07-09 02:10:23 | announced | |
Publication List
Iavarone F, Olianas A, Patini R, Gallenzi P, Di Tonno L, Desiderio C, Cabras T, Manconi B, Vincenzoni F, Cordaro M, Messana I, Urbani A, Castagnola M, Top down proteomic analysis of gingival crevicular fluid in deciduous, exfoliating and permanent teeth in children. J Proteomics, 226():103890(2020) [pubmed] |
Keyword List
submitter keyword: proteomics, top-down, gingival crevicular fluid |
Contact List
Federica Iavarone |
contact affiliation | Istituto di Biochimica e Biochimica Clinica, Università Cattolica del Sacro Cuore, Roma, Italia. Fondazione Policlinico Universitario A. Gemelli IRCCS, Roma, Italia. |
contact email | federica.iavarone@unicatt.it |
lab head | |
Federica Iavarone |
contact affiliation | Biochemistry and Clinical Biochemistry Institute, Medicine Faculty, Catholic University of Rome Fondazione Policlinico Universitario A. Gemelli IRCCS Rome Italy |
contact email | federica.iavarone@unicatt.it |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/07/PXD016049 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD016049
- Label: PRIDE project
- Name: Neutrophil Defensins (Alpha-Defensins)