PXD015919-1
PXD015919 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | Membrane protein landscape of plant nuclear envelope and nuclear pore complex |
Description | We used biochemical fractionation coupled with the subtractive proteomics to profile PNET proteins. Both the crude NE and the total MM fraction were subject to label-free quantitative mass spectrometry (LFQMS). We also adapted proximity labeling-coupled LFQMS (PL-LFQMS) method to map the PNET proteome. Overall, We identified over 200 potential candidates for plant nuclear envelope transmembrane (PNET) proteins and confirmed 14 PNETs. |
HostingRepository | iProX |
AnnounceDate | 2019-10-20 |
AnnouncementXML | Submission_2020-03-10_21:25:48.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Yu Tang |
SpeciesList | scientific name: Arabidopsis thaliana; NCBI TaxID: 3702; |
ModificationList | N6-biotinyl-L-lysine |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2019-10-20 03:11:04 | ID requested | |
⏵ 1 | 2020-03-10 21:25:49 | announced | |
2 | 2020-11-19 00:29:18 | announced | 2020-11-19: Update publication information |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Arabidopsis seedling, PNET, NE, MM, BioID2, LFQMS, PL-LFQMS |
Contact List
Yangnan Gu | |
---|---|
contact affiliation | Department of Plant & Microbial Biology, University of California, Berkeley |
contact email | guyangnan@berkeley.edu |
lab head | |
Yu Tang | |
contact affiliation | Tsinghua University |
contact email | tang414yu@163.com |
dataset submitter |
Full Dataset Link List
iProX dataset URI |