PXD014814 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Thermococcus kodakarensis proteins expressed at various temperatures reveals changes in RNA modifications |
Description | Thermococcus kodakarensis is a thermophilic archaea used in this study to determine how changes in growth temperature affect protein expression. This organism was chosen, in part, due to the simplified proteome and potential protein stability gained when analyzing proteins at room temperature. Two temperatures were used as well as one knockout cell line to determine the differences in protein expression. Specifically, changes in protein expression levels were used in conjunction with other data to determine the changing levels of RNA modification based on expression temperature. |
HostingRepository | PRIDE |
AnnounceDate | 2020-02-18 |
AnnouncementXML | Submission_2020-02-17_23:48:40.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD014814 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Michaella Levy |
SpeciesList | scientific name: Thermococcus kodakarensis KOD1; NCBI TaxID: 69014; |
ModificationList | acetylated residue; monohydroxylated residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-07-29 09:09:07 | ID requested | |
⏵ 1 | 2020-02-17 23:48:41 | announced | |
2 | 2020-07-23 23:04:59 | announced | 2020-07-24: Updated publication reference for PubMed record(s): 32555463. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Proteomics, QExactive Plus, theromphile, Thermococcus kodakarensis |
Contact List
Laurence Florens |
contact affiliation | Stowers Institute for Medical Research |
contact email | laf@stowers.org |
lab head | |
Michaella Levy |
contact affiliation | Stowers Institute for Medical Research |
contact email | mly@stowers.org |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD014814
- Label: PRIDE project
- Name: Thermococcus kodakarensis proteins expressed at various temperatures reveals changes in RNA modifications