PXD014505 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomics of an artificial mixture of three microorganisms to evaluate sample preparation methods for tandem mass spectrometry proteotyping |
Description | This project provides tandem mass spectrometry datasets of an artificial mixture used to optimize the lysis and evaluate digestion protocols for a fast preparation of peptides for tandem mass spectrometry proteotyping. The microorganism mixture is composed of Bacillus subtilis subsp. spizizenii ATCC 6633, Escherichia coli BL21-Gold(DE3)pLysS AG and Saccharomyces cerevisiae S288C. |
HostingRepository | PRIDE |
AnnounceDate | 2019-09-30 |
AnnouncementXML | Submission_2019-09-30_01:50:48.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD014505 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Jean ARMENGAUD |
SpeciesList | scientific name: Escherichia coli; NCBI TaxID: 562; scientific name: Bacillus subtilis subsp. spizizenii ATCC 6633; NCBI TaxID: 703612; scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932; |
ModificationList | Oxidation; Carbamidomethyl |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-07-05 03:22:45 | ID requested | |
⏵ 1 | 2019-09-30 01:50:49 | announced | |
Publication List
Hayoun K, Gouveia D, Grenga L, Pible O, Armengaud J, Alpha-Bazin B, Evaluation of Sample Preparation Methods for Fast Proteotyping of Microorganisms by Tandem Mass Spectrometry. Front Microbiol, 10():1985(2019) [pubmed] |
Keyword List
submitter keyword: Sample preparation |
Shotgun proteomics |
Microorganisms |
proteotyping |
Contact List
Jean ARMENGAUD |
contact affiliation | CEA, DRF/JOLIOT/DMTS/SPI/Li2D, Laboratory “Innovative Technologies for Detection and Diagnostics |
contact email | jean.armengaud@cea.fr |
lab head | |
Jean ARMENGAUD |
contact affiliation | Li2D |
contact email | jean.armengaud@cea.fr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/09/PXD014505 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD014505
- Label: PRIDE project
- Name: Proteomics of an artificial mixture of three microorganisms to evaluate sample preparation methods for tandem mass spectrometry proteotyping