PXD014505

PXD014505 is an original dataset announced via ProteomeXchange.

Title	Proteomics of an artificial mixture of three microorganisms to evaluate sample preparation methods for tandem mass spectrometry proteotyping
Description	This project provides tandem mass spectrometry datasets of an artificial mixture used to optimize the lysis and evaluate digestion protocols for a fast preparation of peptides for tandem mass spectrometry proteotyping. The microorganism mixture is composed of Bacillus subtilis subsp. spizizenii ATCC 6633, Escherichia coli BL21-Gold(DE3)pLysS AG and Saccharomyces cerevisiae S288C.
HostingRepository	PRIDE
AnnounceDate	2019-09-30
AnnouncementXML	Submission_2019-09-30_01:50:48.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD014505
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562; scientific name: Bacillus subtilis subsp. spizizenii ATCC 6633; NCBI TaxID: 703612; scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationList	Oxidation; Carbamidomethyl
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2019-07-05 03:22:45	ID requested
⏵ 1	2019-09-30 01:50:49	announced

Hayoun K, Gouveia D, Grenga L, Pible O, Armengaud J, Alpha-Bazin B, Evaluation of Sample Preparation Methods for Fast Proteotyping of Microorganisms by Tandem Mass Spectrometry. Front Microbiol, 10():1985(2019) [pubmed]

submitter keyword: Sample preparation

Shotgun proteomics

Microorganisms

proteotyping

Jean ARMENGAUD
contact affiliation	CEA, DRF/JOLIOT/DMTS/SPI/Li2D, Laboratory “Innovative Technologies for Detection and Diagnostics
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/09/PXD014505

PRIDE project URI

• PRIDE
  1. PXD014505
     1. Label: PRIDE project
     2. Name: Proteomics of an artificial mixture of three microorganisms to evaluate sample preparation methods for tandem mass spectrometry proteotyping