PXD013600 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | An in vitro model maintaining taxon-specific functional activities of the gut microbiome |
Description | We developed and validated a 96-deep well plate-based culturing model named Mipro to maintain individuals’ microbiomes. The Mipro model quintupled viable bacteria count while maintained the functional and compositional profiles of individuals’ gut microbiomes. |
HostingRepository | PRIDE |
AnnounceDate | 2019-08-16 |
AnnouncementXML | Submission_2019-08-16_00:33:54.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Leyuan Li |
SpeciesList | scientific name: Escherichia coli; NCBI TaxID: 562; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-04-23 05:43:16 | ID requested | |
⏵ 1 | 2019-08-16 00:33:55 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: in vitro culturing, gut microbiome, metaproteomics |
Contact List
Daniel Figeys |
contact affiliation | Faculty of Medicine, University of Ottawa, Canada |
contact email | dfigeys@uottawa.ca |
lab head | |
Leyuan Li |
contact affiliation | Universtiy of Ottawa |
contact email | lli8@uottawa.ca |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/08/PXD013600 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD013600
- Label: PRIDE project
- Name: An in vitro model maintaining taxon-specific functional activities of the gut microbiome