PXD013180

PXD013180 is an original dataset announced via ProteomeXchange.

Title	Identification of proteins able to interact with the WD40 domain of ATG16L1
Description	Cell lines of different origin (JAR (choriocarcinoma) and THP1 (monocytes, both untreated and activated by LPS/PMA)) expressing the WD40 domain of ATG16L1 fused to GST were lysed and the resulting supernatants subjected to agarose-GSH immunoprecipitation. Co-precipitating proteins were resolved by PAGE and the specific bands excised for identification using an LTQ-Orbitrap Velos device.
HostingRepository	PRIDE
AnnounceDate	2019-03-21
AnnouncementXML	Submission_2019-03-21_10:12:27.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD013180
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Nieves Ibarrola
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	L-cysteine residue; L-arginine residue; residues isobaric at 113.084064 Da; L-histidine residue; residues isobaric at 128.058578 Da; Oxidation; L-lysine residue; L-tyrosine residue; Acetyl; L-proline residue; Carbamidomethyl; residues isobaric at 71.037114 Da
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2019-03-21 07:05:30	ID requested
⏵ 1	2019-03-21 10:12:27	announced

Dataset with its publication pending

submitter keyword: Human, cell line, ATG16L1, autophagy

Felipe X. Pimentel-Muiños
contact affiliation	Instituto de Biología Molecular y Celular del Cáncer (IBMCC), Centro de Investigación del Cáncer (CSIC-USAL). Universidad de Salamanca, Campus Unamuno. Salamanca 37007. Spain.
contact email	fxp@usal.es
lab head
Nieves Ibarrola
contact affiliation	Center for Cancer Research
contact email	nibarrola@usal.es
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD013180

PRIDE project URI

• PRIDE
  1. PXD013180
     1. Label: PRIDE project
     2. Name: Identification of proteins able to interact with the WD40 domain of ATG16L1