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PXD013113 is an original dataset announced via ProteomeXchange.

Dataset Summary

  • Title: Proteomic analysis of 3D cultures of fibroblasts and Ras-transformed HaCaT keratinocytes
  • Description: HaCaT, and its three retrovirally c-Ha-ras-transformed subclones, A5, II-4 and RT3 (abbreviated as ras-HaCaTs in the text) that exhibit benign, invasive and malignant phenotypes, respectively, were cultured as 3D monocultures and co-cultures with fibroblasts. After hypotonic lysis of the cells, the insoluble proteins were analysed by LC-MS/MS.
  • HostingRepository: PRIDE
  • AnnounceDate: 2019-09-11
  • AnnouncementXML: Submission_2019-09-11_00:58:21.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original dataset
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: Pekka Rappu
  • SpeciesList: scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
  • ModificationList: monohydroxylated residue; iodoacetamide derivatized residue
  • Instrument: Q Exactive

Dataset History

RevisionDatetimeStatusChangeLog Entry
02019-03-18 02:50:42ID requested
12019-09-11 00:58:22announced

Publication List

  1. Dataset with its publication pending

Keyword List

  1. submitter keyword: HRAS, HaCat, fibroblast keratinocyte

Contact List

    Jyrki Heino
    • contact affiliation: Biochemistry, University of Turku, Turku, Finland
    • contact email: jyrki.heino@utu.fi
    • lab head:
    Pekka Rappu
    • contact affiliation: University of Turku
    • contact email: pekka.rappu@utu.fi
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List

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