PXD013088 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Systems analyses reveal the remarkable resilience of Escherichia coli physiology during accumulation and export of the non-native organic acid citramalate |
Description | Proteomics part of multi-omic analyses of the citramalate fermentation were undertaken to uncover the reasons for remarkable citramalate productivity in an engineered strain of E. coli. |
HostingRepository | PRIDE |
AnnounceDate | 2019-06-05 |
AnnouncementXML | Submission_2019-06-05_04:42:10.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | David-Paul Minde |
SpeciesList | scientific name: Escherichia coli; NCBI TaxID: 562; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-03-13 09:09:36 | ID requested | |
⏵ 1 | 2019-06-05 04:42:10 | announced | |
2 | 2019-06-17 03:24:18 | announced | Updated publication reference for PubMed record(s): 31186337. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: citramalate, citramalic acid, Escherichia coli, fed-batch fermentation, bioproduction of chemicals, lipidomics, proteomics, metabolomics, transcriptomics |
Contact List
Prof. Kathryn S Lilley |
contact affiliation | 1 Cambridge Systems Biology Centre, University of Cambridge, Cambridge, UK 2 Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Cambridge, UK 3 Department of Biochemistry, University of Cambridge, Cambridge, UK |
contact email | ksl23@cam.ac.uk |
lab head | |
David-Paul Minde |
contact affiliation | CPC |
contact email | dpm43@cam.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD013088 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD013088
- Label: PRIDE project
- Name: Systems analyses reveal the remarkable resilience of Escherichia coli physiology during accumulation and export of the non-native organic acid citramalate