<< Full experiment listing


PXD013088 is an original dataset announced via ProteomeXchange.

Dataset Summary

  • Title: Systems analyses reveal the remarkable resilience of Escherichia coli physiology during accumulation and export of the non-native organic acid citramalate
  • Description: Proteomics part of multi-omic analyses of the citramalate fermentation were undertaken to uncover the reasons for remarkable citramalate productivity in an engineered strain of E. coli.
  • HostingRepository: PRIDE
  • AnnounceDate: 2019-06-05
  • AnnouncementXML: Submission_2019-06-17_03:24:16.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original dataset
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: David-Paul Minde
  • SpeciesList: scientific name: Escherichia coli; NCBI TaxID: 562;
  • ModificationList: No PTMs are included in the dataset
  • Instrument: Q Exactive

Dataset History

RevisionDatetimeStatusChangeLog Entry
02019-03-13 09:09:36ID requested
12019-06-05 04:42:10announced
22019-06-17 03:24:18announcedUpdated publication reference for PubMed record(s): 31186337.

Publication List

  1. Webb J, Springthorpe V, Rossoni L, Minde DP, Langer S, Walker H, Alstrom-Moore A, Larson T, Lilley K, Eastham G, Stephens G, Thomas GH, Kelly DJ, Green J, Systems Analyses Reveal the Resilience of Escherichia coli Physiology during Accumulation and Export of the Nonnative Organic Acid Citramalate. mSystems, 4(4):(2019) [pubmed]

Keyword List

  1. submitter keyword: citramalate, citramalic acid, Escherichia coli, fed-batch fermentation, bioproduction of chemicals, lipidomics, proteomics, metabolomics, transcriptomics

Contact List

    Prof. Kathryn S Lilley
    • contact affiliation: 1 Cambridge Systems Biology Centre, University of Cambridge, Cambridge, UK 2 Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Cambridge, UK 3 Department of Biochemistry, University of Cambridge, Cambridge, UK
    • contact email: ksl23@cam.ac.uk
    • lab head:
    David-Paul Minde
    • contact affiliation: CPC
    • contact email: dpm43@cam.ac.uk
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List

If you have a question or comment about ProteomeXchange, please contact us!
to receive all new ProteomeXchange dataset release announcements!