PXD011937 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomics characterization of Chromosomal Common Fragile Site (CFS) - associated proteins uncovers ATRX as a regulator of CFS stability |
Description | Chromosomal Common Fragile Sites (CFSs) are conserved regions of our genome prone to break in conditions of replication stress (RS. Here, we have performed Chromatin Immunoprecipitation (ChIP) with FACND2 antibodies coupled to Mass Spectrometry to isolate CFSs from HeLa cells and identify the proteins enriched at these loci. |
HostingRepository | PRIDE |
AnnounceDate | 2019-06-11 |
AnnouncementXML | Submission_2019-06-11_08:15:15.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Stephanie Munk |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-12-05 02:01:59 | ID requested | |
⏵ 1 | 2019-06-11 08:15:16 | announced | |
2 | 2019-06-12 00:28:09 | announced | Updated publication reference for PubMed record(s): 31180492. |
Publication List
Dataset with its publication pending |
Keyword List
curator keyword: Biological |
submitter keyword: Common fragile sites, LC-MS/MS, HeLa, interactome, ATRX |
Contact List
Andres Joaquin Lopez-Contreras |
contact affiliation | Department of Cellular and Molecular Medicine, Center for Chromosome Stability and Center for Healthy Aging, University of Copenhagen, Copenhagen 2200, Denmark |
contact email | ajlopez@sund.ku.dk |
lab head | |
Stephanie Munk |
contact affiliation | Copenhagen University |
contact email | wtv380@cpr.ku.dk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD011937 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD011937
- Label: PRIDE project
- Name: Proteomics characterization of Chromosomal Common Fragile Site (CFS) - associated proteins uncovers ATRX as a regulator of CFS stability