PXD009473 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | HDL proteome across 93 mouse strains |
Description | High-density lipoproteins (HDL) are nanoparticles with >80 associated proteins, phospholipids, cholesterol and cholesteryl esters. We have identified and quantified the ultracentrifugation isolated HDL proteome across 93 strains of mice, a diverse inbred strains of mice, Hybrid Mouse Diversity Panel (HMDP). |
HostingRepository | PRIDE |
AnnounceDate | 2019-04-24 |
AnnouncementXML | Submission_2019-04-24_08:50:32.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Nathalie Pamir |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; |
ModificationList | No PTMs are included in the dataset |
Instrument | Orbitrap Fusion |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-04-11 07:48:01 | ID requested | |
⏵ 1 | 2019-04-24 08:50:33 | announced | |
Publication List
Pamir N, Pan C, Plubell DL, Hutchins PM, Tang C, Wimberger J, Irwin A, Vallim TQA, Heinecke JW, Lusis AJ, Genetic control of the mouse HDL proteome defines HDL traits, function, and heterogeneity. J Lipid Res, 60(3):594-608(2019) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: HDL, mouse, strains |
Contact List
Nathalie Pamir |
contact affiliation | Oregon Health & Science University Departments of Medicine and Biochemistry |
contact email | pamir@ohsu.edu |
lab head | |
Nathalie Pamir |
contact affiliation | Oregon Health & Science University |
contact email | pamir@ohsu.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD009473 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD009473
- Label: PRIDE project
- Name: HDL proteome across 93 mouse strains