PXD009473

PXD009473 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	HDL proteome across 93 mouse strains
Description	High-density lipoproteins (HDL) are nanoparticles with >80 associated proteins, phospholipids, cholesterol and cholesteryl esters. We have identified and quantified the ultracentrifugation isolated HDL proteome across 93 strains of mice, a diverse inbred strains of mice, Hybrid Mouse Diversity Panel (HMDP).
HostingRepository	PRIDE
AnnounceDate	2019-04-24
AnnouncementXML	Submission_2019-04-24_08:50:32.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nathalie Pamir
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-04-11 07:48:01	ID requested
⏵ 1	2019-04-24 08:50:33	announced

Publication List

Pamir N, Pan C, Plubell DL, Hutchins PM, Tang C, Wimberger J, Irwin A, Vallim TQA, Heinecke JW, Lusis AJ, Genetic control of the mouse HDL proteome defines HDL traits, function, and heterogeneity. J Lipid Res, 60(3):594-608(2019) [pubmed]

Pamir N, Pan C, Plubell DL, Hutchins PM, Tang C, Wimberger J, Irwin A, Vallim TQA, Heinecke JW, Lusis AJ, Genetic control of the mouse HDL proteome defines HDL traits, function, and heterogeneity. J Lipid Res, 60(3):594-608(2019) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: HDL, mouse, strains

curator keyword: Biological

submitter keyword: HDL, mouse, strains

Contact List

Nathalie Pamir
contact affiliation	Oregon Health & Science University Departments of Medicine and Biochemistry
contact email	pamir@ohsu.edu
lab head
Nathalie Pamir
contact affiliation	Oregon Health & Science University
contact email	pamir@ohsu.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD009473
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD009473

PRIDE project URI

Repository Record List

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