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PXD009124-1

PXD009124 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleLabel-free quantitative proteomic approach to investigate the effect of heat stress on Panax ginseng leaves
DescriptionGinseng is one of the well-known medicinal plants, exhibiting diverse medicinal effects. Its roots possess anticancer and anti-aging properties and are being used in the medical systems of East Asian countries. Ginseng is grown in low-light and low-temperature conditions and its growth is strongly inhibited at temperatures above 25 ℃. However, the molecular responses of ginseng to heat stress are currently poorly understood, especially at protein level. Therefore, here we utilized a shotgun proteomics approach to investigate the effect of heat stress on ginseng leaves. Total proteins were isolated from control (25 ℃) and ginseng plants exposed to 35 ℃ for 1 and 3 days and subjected to in-solution trypsin digestion. A total of 3,359 ginseng proteins were identified when searched in an in-house developed RNA-seq (PAC-BIO) database.
HostingRepositoryPRIDE
AnnounceDate2018-12-11
AnnouncementXMLSubmission_2018-12-11_08:44:14.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterSun Tae Kim
SpeciesList scientific name: Panax ginseng; NCBI TaxID: 4054;
ModificationListNo PTMs are included in the dataset
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-03-06 12:55:59ID requested
12018-12-11 08:44:16announced
22023-11-14 08:49:36announced2023-11-14: Updated project metadata.
Publication List
https://doi.org/10.1016/j.jgr.2018.09.005;
Keyword List
curator keyword: Biological
submitter keyword: Panax ginseng, High temperature injuries, Photosynthetic efficiency, Molecular breeding
Contact List
Sun Tae Kim
contact affiliationDepartment of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, 627-706, South Korea
contact emailstkim5505@gmail.com
lab head
Sun Tae Kim
contact affiliationPusan National University
contact emailstkim5505@gmail.com
dataset submitter
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Dataset FTP location
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PRIDE project URI
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