PXD008005-2

PXD008005 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Quantitative proteomics of AMBRA1
Description	We sought to identify AMBRA1 interacting proteins and to profile its loss/gain of interactions by mutation using quantitative mass spectrometry.
HostingRepository	PRIDE
AnnounceDate	2018-07-11
AnnouncementXML	Submission_2019-03-07_05:40:32.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Si-Han Chen
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue; monohydroxylated residue; acetylated residue
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-10-19 02:21:38	ID requested
1	2018-07-11 08:33:03	announced
⏵ 2	2019-03-07 05:40:33	announced	Updated publication reference for PubMed record(s): 30166453.

Publication List

Chen SH, Jang GM, H, ü, ttenhain R, Gordon DE, Du D, Newton BW, Johnson JR, Hiatt J, Hultquist JF, Johnson TL, Liu YL, Burton LA, Ye J, Reichermeier KM, Stroud RM, Marson A, Debnath J, Gross JD, Krogan NJ, targets Elongin C for ubiquitination and degradation to modulate CRL5 signaling. EMBO J, 37(18):(2018) [pubmed]

Chen SH, Jang GM, H, ü, ttenhain R, Gordon DE, Du D, Newton BW, Johnson JR, Hiatt J, Hultquist JF, Johnson TL, Liu YL, Burton LA, Ye J, Reichermeier KM, Stroud RM, Marson A, Debnath J, Gross JD, Krogan NJ, targets Elongin C for ubiquitination and degradation to modulate CRL5 signaling. EMBO J, 37(18):(2018) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: AMBRA1, DDB1, Cullin-RING ubiquitin ligase, E3

curator keyword: Biological

submitter keyword: AMBRA1, DDB1, Cullin-RING ubiquitin ligase, E3

Contact List

Nevan Krogan
contact affiliation	Department of Cellular and Molecular Pharmacology University of California San Francisco
contact email	nevan.krogan@ucsf.edu
lab head
Si-Han Chen
contact affiliation	Genentech Inc.
contact email	niwhoo@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/07/PXD008005
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/07/PXD008005

PRIDE project URI

Repository Record List

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