PXD007987

PXD007987 is an original dataset announced via ProteomeXchange.

Title	Scallop byssal protein identification, part 2
Description	To explore the protein components for scallop byssus, the soluble fractions of scallop byssus was extract. For mass spectrometric analysis, proteins were extracted from byssal adhesive plaques, and the whole protein smple was treated with trypsin and analyzed using Thermo Fisher Q Exactive Mass Spectrometer (Thermo Fisher Scientific, USA). The mass spectrometry raw data were searched against the full set of predicted proteins from the C. farreri genome and Transcriptome using Mascot v2.3.0 (Matrix Science, London, UK).
HostingRepository	PRIDE
AnnounceDate	2018-10-23
AnnouncementXML	Submission_2018-10-23_14:26:04.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Xiaokang Zhang
SpeciesList	scientific name: Azumapecten farreri; NCBI TaxID: 106299;
ModificationList	monohydroxylated residue; iodoacetic acid derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2017-10-18 01:42:32	ID requested
⏵ 1	2018-10-23 14:26:06	announced

Li Y, Sun X, Hu X, Xun X, Zhang J, Guo X, Jiao W, Zhang L, Liu W, Wang J, Li J, Sun Y, Miao Y, Zhang X, Cheng T, Xu G, Fu X, Wang Y, Yu X, Huang X, Lu W, Lv J, Mu C, Wang D, Li X, Xia Y, Li Y, Yang Z, Wang F, Zhang L, Xing Q, Dou H, Ning X, Dou J, Li Y, Kong D, Liu Y, Jiang Z, Li R, Wang S, Bao Z, Scallop genome reveals molecular adaptations to semi-sessile life and neurotoxins. Nat Commun, 8(1):1721(2017) [pubmed]

curator keyword: Biological

submitter keyword: Scallop byssus, protein identification, adhesion, LC-MSMS

Weizhi liu
contact affiliation	College of Marine Life Sciences, Ocean University of China, Qingdao, China
contact email	liuweizhi@ouc.edu.cn
lab head
Xiaokang Zhang
contact affiliation	Ocean University of China
contact email	xiaokangzhang@126.com
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD007987
     1. Label: PRIDE project
     2. Name: Scallop byssal protein identification, part 2