PXD005923 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Analysis of the Gulf toadfish intestinal proteome response to chronic hypersalinity exposure |
Description | The marine teleost intestine plays a vital role in whole body salt and water homeostasis. Marine fish must drink seawater in order to rehydrate, and processing of that seawater throughout the gastrointestinal tract allows for the extraction of water from this highly hyperosmotic source. Although the molecular mechanisms of this process have been the subject of much investigation, numerous questions remain. Here, Gulf toadfish (Opsanus beta) were acclimated to normal seawater (35 ppt) of hypersaline seawater (60 ppt) and changes in the anterior intestine, posterior intestine, and intestinal fluid proteomes were investigated using a shotgun proteomics approach employing isobaric TMT tags. |
HostingRepository | PRIDE |
AnnounceDate | 2018-06-26 |
AnnouncementXML | Submission_2018-07-06_03:00:32.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD005923 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Kevin Schauer |
SpeciesList | scientific name: Opsanus beta; NCBI TaxID: 95145; |
ModificationList | TMT6plex; Oxidation; Carbamidomethyl |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-02-14 07:31:04 | ID requested | |
1 | 2018-06-26 06:29:59 | announced | |
⏵ 2 | 2018-07-06 03:00:34 | announced | Updated publication reference for PubMed record(s): 29966935. |
Publication List
Schauer KL, Reddam A, Xu EG, Wolfe LM, Grosell M, Interrogation of the Gulf toadfish intestinal proteome response to hypersalinity exposure provides insights into osmoregulatory mechanisms and regulation of carbonate mineral precipitation. Comp Biochem Physiol Part D Genomics Proteomics, 27():66-76(2018) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: Opsanus beta, TMT, hypersalinity, Gulf toadfish, intestine, intestinal fluid, LC-MS/MS, teleost, marine |
Contact List
Martin Grosell |
contact affiliation | Department of Marine Biology and Ecology, Rosenstiel School of Marine and Atmospheric Science, University of Miami, Miami, FL, USA |
contact email | mgrosell@rsmas.miami.edu |
lab head | |
Kevin Schauer |
contact affiliation | Rosenstiel School of Marine & Atmospheric Science, University of Miami |
contact email | kschauer@rsmas.miami.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/06/PXD005923 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD005923
- Label: PRIDE project
- Name: Analysis of the Gulf toadfish intestinal proteome response to chronic hypersalinity exposure