PXD005923

PXD005923 is an original dataset announced via ProteomeXchange.

Title	Analysis of the Gulf toadfish intestinal proteome response to chronic hypersalinity exposure
Description	The marine teleost intestine plays a vital role in whole body salt and water homeostasis. Marine fish must drink seawater in order to rehydrate, and processing of that seawater throughout the gastrointestinal tract allows for the extraction of water from this highly hyperosmotic source. Although the molecular mechanisms of this process have been the subject of much investigation, numerous questions remain. Here, Gulf toadfish (Opsanus beta) were acclimated to normal seawater (35 ppt) of hypersaline seawater (60 ppt) and changes in the anterior intestine, posterior intestine, and intestinal fluid proteomes were investigated using a shotgun proteomics approach employing isobaric TMT tags.
HostingRepository	PRIDE
AnnounceDate	2018-06-26
AnnouncementXML	Submission_2018-07-06_03:00:32.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD005923
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Kevin Schauer
SpeciesList	scientific name: Opsanus beta; NCBI TaxID: 95145;
ModificationList	TMT6plex; Oxidation; Carbamidomethyl
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2017-02-14 07:31:04	ID requested
1	2018-06-26 06:29:59	announced
⏵ 2	2018-07-06 03:00:34	announced	Updated publication reference for PubMed record(s): 29966935.

Schauer KL, Reddam A, Xu EG, Wolfe LM, Grosell M, Interrogation of the Gulf toadfish intestinal proteome response to hypersalinity exposure provides insights into osmoregulatory mechanisms and regulation of carbonate mineral precipitation. Comp Biochem Physiol Part D Genomics Proteomics, 27():66-76(2018) [pubmed]

curator keyword: Biological

submitter keyword: Opsanus beta, TMT, hypersalinity, Gulf toadfish, intestine, intestinal fluid, LC-MS/MS, teleost, marine

Martin Grosell
contact affiliation	Department of Marine Biology and Ecology, Rosenstiel School of Marine and Atmospheric Science, University of Miami, Miami, FL, USA
contact email	mgrosell@rsmas.miami.edu
lab head
Kevin Schauer
contact affiliation	Rosenstiel School of Marine & Atmospheric Science, University of Miami
contact email	kschauer@rsmas.miami.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/06/PXD005923

PRIDE project URI

• PRIDE
  1. PXD005923
     1. Label: PRIDE project
     2. Name: Analysis of the Gulf toadfish intestinal proteome response to chronic hypersalinity exposure