PXD005810

PXD005810 is an original dataset announced via ProteomeXchange.

Title	Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection
Description	We have investigated the dynamic host response to HIV-1 infection by systematically measuring transcriptome, proteome and phosphoproteome expression changes in infected and uninfected SupT1 CD4+ T cells at 5 time-points throughout the HIV-1 replication cycle (from 2h to 24h).
HostingRepository	PRIDE
AnnounceDate	2019-01-23
AnnouncementXML	Submission_2019-01-23_00:30:15.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Manfredo Quadroni
SpeciesList	scientific name: Human immunodeficiency virus type 1 3916-CRO; NCBI TaxID: 657192; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2017-01-30 07:47:31	ID requested
1	2019-01-22 07:07:32	announced
⏵ 2	2019-01-23 00:30:17	announced	Updated project metadata.

Golumbeanu M, Desfarges S, Hernandez C, Quadroni M, Rato S, Mohammadi P, Telenti A, Beerenwinkel N, Ciuffi A, Proteo-Transcriptomic Dynamics of Cellular Response to HIV-1 Infection. Sci Rep, 9(1):213(2019) [pubmed]

curator keyword: Biomedical

submitter keyword: Human, HIV, T-cells, infection, viral replication, proteomics, transcriptomics, phosphoprotein

Manfredo Quadroni
contact affiliation	Center for Integrative Genomics, University of Lausanne, Switzerland
contact email	manfredo.quadroni@unil.ch
lab head
Manfredo Quadroni
contact affiliation	University of Lausanne
contact email	manfredo.quadroni@unil.ch
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/01/PXD005810

PRIDE project URI

• PRIDE
  1. PXD005810
     1. Label: PRIDE project
     2. Name: Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection