PXD004527

PXD004527 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	StDenis_Mitosis_P84_VS10_VS13_FLAG_Velos
Description	This dataset consists of 196 raw MS files and associated peak lists and result files, all acquired on a Velos Orbitrap mass spectrometer. Three datasets are associated with this manuscript by St-Denis et al. that describes the interactome for human phosphatases and the function of phosphatases in mitosis. Note that the negative controls and the myotubularin data were also submitted separately as part of a publication on the Myotubularin interactome (St-Denis et al., Mol Cell Proteomics, 2015; PMID 25659891) and assigned to MassIVE ID MSV000078915. See the README file within Methods and Protocols and the Supplementary File description and peptide and interaction identification results in Supplementary Files.
HostingRepository	MassIVE
AnnounceDate	2016-11-22
AnnouncementXML	Submission_2016-11-22_09:38:15.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Gingras Lab
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	deamidated L-asparagine; deamidated L-glutamine; L-methionine sulfoxide
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-07-07 13:25:14	ID requested
⏵ 1	2016-11-22 09:38:15	announced

Publication List

Nicole St-Denis, Gagan D. Gupta, Zhen Yuan Lin, Beatriz Gonzalez-Badillo, Amanda O. Veri, James D.R. Knight, Dushyandi Rajendran, Amber L. Couzens, Ko W. Currie, Johnny M. Tkach, Sally W.T. Cheung, Laurence Pelletier, Anne-Claude Gingras. Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators. Cell Reports , Volume 17 , Issue 9 , 2488 - 2501. doi: 10.1016/j.celrep.2016.10.078.

Nicole St-Denis, Gagan D. Gupta, Zhen Yuan Lin, Beatriz Gonzalez-Badillo, Amanda O. Veri, James D.R. Knight, Dushyandi Rajendran, Amber L. Couzens, Ko W. Currie, Johnny M. Tkach, Sally W.T. Cheung, Laurence Pelletier, Anne-Claude Gingras. Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators. Cell Reports , Volume 17 , Issue 9 , 2488 - 2501. doi: 10.1016/j.celrep.2016.10.078.

Keyword List

submitter keyword: Affinity purification, Protein-protein interactions, Phosphatases, Interactome, FLAG AP-MS

submitter keyword: Affinity purification, Protein-protein interactions, Phosphatases, Interactome, FLAG AP-MS

Contact List

principal_investigator
lab head
Gingras Lab
contact affiliation	Samuel Lunenfeld Research Institute
contact email	gingras@mshri.on.ca
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000079891

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000079891