PXD003624-1

PXD003624 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Identification of BNC2 interactors in human LX2 cells using RIME
Description	The goal of this study was to use Rapid Immunoprecipitation Mass spectrometry of Endogenous protein (RIME) assays (Mohammed et al., 2016) to identify transcriptional regulatory partners of the transcription factor BNC2 in LX2 cells. Protein complexes were immune-precipitated with an anti-BNC2 antibody (55220-1-AP, Proteintech) or control non-immune IgG (normal rabbit IgG #2729, Cell Signaling) before being subjected to MS.
HostingRepository	PRIDE
AnnounceDate	2022-08-05
AnnouncementXML	Submission_2022-08-05_07:59:12.769.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD003624
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean-Marc STRUB
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	timsTOF Pro

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-02-12 03:30:12	ID requested
⏵ 1	2022-08-05 07:59:13	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Rapid immunoprecipitation mass spectrometry of endogenous proteins (RIME)
human
LX2
hepatic stellate cells
BNC2

submitter keyword: Rapid immunoprecipitation mass spectrometry of endogenous proteins (RIME)

human

LX2

hepatic stellate cells

BNC2

Contact List

Strub Jean-Marc
contact affiliation	Laboratoire de Spectrométrie de Masse Bio-Organique Département des Sciences Analytiques, Institut Pluridisciplinaire Hubert Curien, UMR 7178 (CNRS-UdS) ECPM, Bat. R5-N0, 25 rue Becquerel F67087-Strasbourg-Cedex 2
contact email	jmstrub@unistra.fr
lab head
Jean-Marc STRUB
contact affiliation	CNRS
contact email	jmstrub@unistra.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD003624
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD003624

PRIDE project URI

Repository Record List

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